STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000235685_01029Unannotated protein. (112 aa)    
Predicted Functional Partners:
GCA_000235685_01030
Unannotated protein.
       0.907
GCA_000235685_01031
Unannotated protein.
       0.884
GCA_000235685_01027
Unannotated protein.
       0.862
GCA_000235685_01028
Unannotated protein.
       0.862
GCA_000235685_01626
Unannotated protein.
  
     0.704
GCA_000235685_00477
Unannotated protein.
  
     0.639
GCA_000235685_00700
Unannotated protein.
  
     0.626
GCA_000235685_00692
Unannotated protein.
  
     0.603
GCA_000235685_01134
Unannotated protein.
  
     0.591
GCA_000235685_01632
Unannotated protein.
  
     0.574
Your Current Organism:
Methanolinea tarda
NCBI taxonomy Id: 882090
Other names: M. tarda NOBI-1, Methanolinea tarda DSM 16494, Methanolinea tarda NOBI-1, Methanolinea tarda str. NOBI-1, Methanolinea tarda strain NOBI-1, methanogenic archaeon NOBI-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.