STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000235685_01424Unannotated protein. (554 aa)    
Predicted Functional Partners:
GCA_000235685_01425
Unannotated protein.
 
  
 0.962
GCA_000235685_01327
Unannotated protein.
 
  
 0.881
GCA_000235685_00429
Unannotated protein.
 
  
 0.874
GCA_000235685_00428
Unannotated protein.
 
  
 0.854
GCA_000235685_01323
Unannotated protein.
  
  
 0.823
GCA_000235685_01325
Unannotated protein.
 
  
 0.783
GCA_000235685_01426
Unannotated protein.
       0.777
GCA_000235685_01423
Unannotated protein.
 
     0.652
GCA_000235685_01422
Unannotated protein.
 
   
 0.643
GCA_000235685_01324
Unannotated protein.
  
  
 0.588
Your Current Organism:
Methanolinea tarda
NCBI taxonomy Id: 882090
Other names: M. tarda NOBI-1, Methanolinea tarda DSM 16494, Methanolinea tarda NOBI-1, Methanolinea tarda str. NOBI-1, Methanolinea tarda strain NOBI-1, methanogenic archaeon NOBI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.