Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HEY1Hes related family bHLH transcription factor with YRPW motif 1. (193 aa)    
Predicted Functional Partners:
HEY2
Hes related family bHLH transcription factor with YRPW motif 2.
     
  0.893
HEYL
Hes related family bHLH transcription factor with YRPW motif like.
     
  0.893
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.866
NOTCH1
Notch receptor 1.
    
 0.837
FANCM
FA complementation group M.
     
  0.800
NOTCH2
Notch receptor 2.
    
 0.728
PGGT1B
Protein geranylgeranyltransferase type I subunit beta.
    
 
 0.724
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
    
 0.712
JAG1
Jagged canonical Notch ligand 1.
    
 
 0.684
DLL4
Delta like canonical Notch ligand 4.
    
 
 0.653
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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