STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEPD1Endonuclease/exonuclease/phosphatase family domain containing 1. (559 aa)    
Predicted Functional Partners:
IWS1
Interacts with SUPT6H, CTD assembly factor 1.
   
 0.807
SSRP1
Structure specific recognition protein 1.
   
 0.801
ENSAHAP00000004948
annotation not available
     
  0.750
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 0.733
ENSAHAP00000026139
annotation not available
   
 0.733
CDC73
Cell division cycle 73.
   
 0.710
SUPT4H1
SPT4 homolog, DSIF elongation factor subunit.
    
 0.691
EXO1
Exonuclease 1.
  
  
 0.658
POLR2E
RNA polymerase II subunit E.
    
 0.657
POLR1C
RNA polymerase I and III subunit C.
   
 0.651
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.