STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPS28Mitochondrial ribosomal protein S28. (171 aa)    
Predicted Functional Partners:
MRPS22
Mitochondrial ribosomal protein S22.
   
  0.999
MRPS16
Mitochondrial ribosomal protein S16.
   
  0.999
ENSAHAP00000003288
annotation not available
   
  0.998
MRPS9
Mitochondrial ribosomal protein S9.
   
  0.998
ENSAHAP00000007117
annotation not available
   
  0.998
ENSAHAP00000008523
annotation not available
   
 0.998
MRPS25
Mitochondrial ribosomal protein S25.
   
  0.998
MRPS23
Mitochondrial ribosomal protein S23.
   
  0.998
CHCHD1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
   
  0.998
MRPS27
Mitochondrial ribosomal protein S27.
   
  0.998
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.