STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000000052annotation not available (1059 aa)    
Predicted Functional Partners:
LRPAP1
LDL receptor related protein associated protein 1.
    
 0.964
LDLRAP1
Low density lipoprotein receptor adaptor protein 1.
    
 0.951
MUSK
Muscle associated receptor tyrosine kinase.
   
 0.909
ENSAHAP00000022209
annotation not available
    
 0.868
LRP1B
LDL receptor related protein 1B.
    
  0.862
ENSAHAP00000015318
annotation not available
    
  0.862
AGRN
Agrin.
    
 0.857
PTCH1
Patched 1.
    
 0.850
PTCH2
Patched 2.
    
 0.844
SHH
Sonic hedgehog signaling molecule.
     
 0.830
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.