STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000000067annotation not available (571 aa)    
Predicted Functional Partners:
ENSAHAP00000000062
annotation not available
 
      0.899
PTPDC1
Protein tyrosine phosphatase domain containing 1.
      
 0.636
ERCC6L
ERCC excision repair 6 like, spindle assembly checkpoint helicase.
      
 0.633
SETD2
SET domain containing 2, histone lysine methyltransferase.
      
 0.608
LATS2
Large tumor suppressor kinase 2.
      
 0.585
ENSAHAP00000004488
annotation not available
      
 0.582
GPER1
G protein-coupled estrogen receptor 1.
      
 0.582
DPH2
Diphthamide biosynthesis 2.
      
 0.575
C18orf63
Chromosome 18 open reading frame 63.
      
 0.512
ENSAHAP00000006196
annotation not available
      
 0.491
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.