STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IRX1Iroquois homeobox 1. (450 aa)    
Predicted Functional Partners:
IRX4
Iroquois homeobox 4.
   
 
 0.916
MKX
Mohawk homeobox.
    
 
 0.866
DLX1
Distal-less homeobox 1.
   
 
 0.753
DLX6
Distal-less homeobox 6.
   
 
 0.651
HHEX
Hematopoietically expressed homeobox.
    
 
 0.623
TSHZ1
Teashirt zinc finger homeobox 1.
    
 0.611
SMYD1
SET and MYND domain containing 1.
    
 
 0.607
HNF1B
HNF1 homeobox B.
    
 0.586
HNF1A
HNF1 homeobox A.
    
 0.575
TSHZ3
Teashirt zinc finger homeobox 3.
    
 0.571
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.