STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000000086annotation not available (174 aa)    
Predicted Functional Partners:
VPS35
VPS35 retromer complex component.
    
 0.776
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.765
PPP6C
Protein phosphatase 6 catalytic subunit.
   
 0.760
ENSAHAP00000000092
annotation not available
 
    
0.751
ENSAHAP00000026132
annotation not available
   
 0.676
TRAF7
TNF receptor associated factor 7.
    
 0.621
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
    
 0.620
PPP6R2
Protein phosphatase 6 regulatory subunit 2.
    
 0.620
ENSAHAP00000021039
annotation not available
  
 
  0.602
NFKBIE
NFKB inhibitor epsilon.
  
 
  0.571
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.