STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000000092annotation not available (134 aa)    
Predicted Functional Partners:
PPP6C
Protein phosphatase 6 catalytic subunit.
   
 0.765
ENSAHAP00000000086
annotation not available
 
    
0.752
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
    
 0.694
PPP6R2
Protein phosphatase 6 regulatory subunit 2.
    
 0.694
SKP1
S-phase kinase associated protein 1.
    
 0.645
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.644
IFT81
Intraflagellar transport 81.
    
 0.642
ASB2
Ankyrin repeat and SOCS box containing 2.
  
  0.634
ENSAHAP00000013827
annotation not available
    
 0.632
ASB1
Ankyrin repeat and SOCS box containing 1.
  
 
  0.619
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.