STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000000092annotation not available (134 aa)    
Predicted Functional Partners:
VPS35
VPS35 retromer complex component.
    
 0.776
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.765
PPP6C
Protein phosphatase 6 catalytic subunit.
   
 0.760
ENSAHAP00000000086
annotation not available
 
    
0.751
ASB2
Ankyrin repeat and SOCS box containing 2.
  
 
  0.678
ENSAHAP00000026132
annotation not available
   
 0.676
TRAF7
TNF receptor associated factor 7.
    
 0.621
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
    
 0.620
PPP6R2
Protein phosphatase 6 regulatory subunit 2.
    
 0.620
ENSAHAP00000021039
annotation not available
  
 
  0.595
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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