STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF7Ring finger protein 7. (56 aa)    
Predicted Functional Partners:
CUL5
Cullin 5.
    
 0.999
ENSAHAP00000022937
annotation not available
   
 0.999
ELOC
Elongin C.
   
 0.998
ENSAHAP00000018237
annotation not available
   
 0.995
CUL1
Cullin 1.
    
 0.995
ARIH2
Ariadne RBR E3 ubiquitin protein ligase 2.
    
 0.994
UBE2C
Ubiquitin conjugating enzyme E2 C.
    
 0.983
ASB11
Ankyrin repeat and SOCS box containing 11.
    
 0.981
SOCS2
Suppressor of cytokine signaling 2.
   
 0.981
ASB7
Ankyrin repeat and SOCS box containing 7.
    
 0.976
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.