Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCL9BCL9 transcription coactivator. (1422 aa)    
Predicted Functional Partners:
LEF1
Lymphoid enhancer binding factor 1.
     
 0.973
BCL9L
BCL9 like.
     
  0.970
TCF7
Transcription factor 7.
     
 0.970
CTNNB1
Catenin beta 1.
    
 0.957
PYGO1
Pygopus family PHD finger 1.
    
 0.948
LDB1
LIM domain binding 1.
    
  0.814
LDB2
LIM domain binding 2.
    
  0.814
ENSAHAP00000007622
annotation not available
     
 0.801
TCF7L2
Transcription factor 7 like 2.
     
 0.801
JUP
Junction plakoglobin.
    
 0.792
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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