STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTS6-pyruvoyltetrahydropterin synthase. (136 aa)    
Predicted Functional Partners:
GCH1
GTP cyclohydrolase 1.
  
 
 0.946
SPR
Sepiapterin reductase.
    
 0.928
NIF3L1
NGG1 interacting factor 3 like 1.
    
 0.880
CBR1
Carbonyl reductase 1.
    
 0.854
ENSAHAP00000011634
annotation not available
    
 0.847
NUDT15
Nudix hydrolase 15.
    
  0.841
ENSAHAP00000025460
annotation not available
    
  0.836
ENSAHAP00000010287
annotation not available
    
  0.783
MMACHC
Metabolism of cobalamin associated C.
    
  0.783
QTRT2
Queuine tRNA-ribosyltransferase accessory subunit 2.
    
 0.775
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.