STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTS6-pyruvoyltetrahydropterin synthase. (136 aa)    
Predicted Functional Partners:
SPR
Sepiapterin reductase.
    
 0.979
GCH1
GTP cyclohydrolase 1.
  
 
 0.970
CBR1
Carbonyl reductase 1.
    
 0.913
ENSAHAP00000011634
annotation not available
    
 0.903
ENSAHAP00000005611
annotation not available
     
  0.893
ENSAHAP00000005630
annotation not available
     
  0.893
GCHFR
GTP cyclohydrolase I feedback regulator.
     
 0.885
ENSAHAP00000027600
annotation not available
    
 0.865
ENSAHAP00000026406
annotation not available
    
 0.845
ENSAHAP00000027594
annotation not available
    
 0.845
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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