STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OVCA2OVCA2 serine hydrolase domain containing. (223 aa)    
Predicted Functional Partners:
DPH1
Diphthamide biosynthesis 1.
 
 
  
 0.987
TYMS
Thymidylate synthetase.
     
 0.890
ATIC
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
     
  0.811
AMT
Aminomethyltransferase.
     
  0.811
FPGS
Folylpolyglutamate synthase.
     
  0.811
ENSAHAP00000014583
annotation not available
     
 0.807
PPCDC
Phosphopantothenoylcysteine decarboxylase.
     
 0.807
MRPS5
Mitochondrial ribosomal protein S5.
    
  0.790
SHMT2
Serine hydroxymethyltransferase 2.
     
 0.749
PIGS
Phosphatidylinositol glycan anchor biosynthesis class S.
   
   0.749
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.