STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RTN4RL1Reticulon 4 receptor like 1. (421 aa)    
Predicted Functional Partners:
SMYD4
SET and MYND domain containing 4.
    
 
 0.712
TSR3
TSR3 ribosome maturation factor.
      
 0.673
NTNG1
Netrin G1.
    
 0.611
ENSAHAP00000024065
annotation not available
      
 0.575
EEF1G
Eukaryotic translation elongation factor 1 gamma.
    
 0.559
ENSAHAP00000007799
annotation not available
    
 0.543
MST1R
Macrophage stimulating 1 receptor.
    
 0.543
ENSAHAP00000027505
annotation not available
    
 0.543
ST3GAL5
ST3 beta-galactoside alpha-2,3-sialyltransferase 5.
    
 0.530
KCNV2
Potassium voltage-gated channel modifier subfamily V member 2.
    
 
 0.482
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.