ENSAHAP00000001022 protein (Apteryx haastii)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSAHAP00000001022

annotation not available (430 aa)

Predicted Functional Partners:

GNAS

0.929

GNAL

0.929

GNB5

0.915

GNB3

0.915

GNG2

0.905

GNB4

0.904

GNG12

0.903

GNG7

0.903

GNG5

0.900

GNG11

0.900

Your Current Organism:

Apteryx haastii

NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAHAP00000001022	GNAL	ENSAHAP00000001022	ENSAHAP00000019762	annotation not available	G protein subunit alpha L.	0.929
ENSAHAP00000001022	GNAS	ENSAHAP00000001022	ENSAHAP00000017903	annotation not available	GNAS complex locus.	0.929
ENSAHAP00000001022	GNB3	ENSAHAP00000001022	ENSAHAP00000018533	annotation not available	G protein subunit beta 3.	0.915
ENSAHAP00000001022	GNB4	ENSAHAP00000001022	ENSAHAP00000015835	annotation not available	G protein subunit beta 4.	0.904
ENSAHAP00000001022	GNB5	ENSAHAP00000001022	ENSAHAP00000004238	annotation not available	G protein subunit beta 5.	0.915
ENSAHAP00000001022	GNG11	ENSAHAP00000001022	ENSAHAP00000005060	annotation not available	G protein subunit gamma 11.	0.900
ENSAHAP00000001022	GNG12	ENSAHAP00000001022	ENSAHAP00000007363	annotation not available	G protein subunit gamma 12.	0.903
ENSAHAP00000001022	GNG2	ENSAHAP00000001022	ENSAHAP00000018174	annotation not available	G protein subunit gamma 2.	0.905
ENSAHAP00000001022	GNG5	ENSAHAP00000001022	ENSAHAP00000002971	annotation not available	G protein subunit gamma 5.	0.900
ENSAHAP00000001022	GNG7	ENSAHAP00000001022	ENSAHAP00000020443	annotation not available	G protein subunit gamma 7.	0.903
GNAL	ENSAHAP00000001022	ENSAHAP00000019762	ENSAHAP00000001022	G protein subunit alpha L.	annotation not available	0.929
GNAL	GNAS	ENSAHAP00000019762	ENSAHAP00000017903	G protein subunit alpha L.	GNAS complex locus.	0.970
GNAL	GNB3	ENSAHAP00000019762	ENSAHAP00000018533	G protein subunit alpha L.	G protein subunit beta 3.	0.980
GNAL	GNB4	ENSAHAP00000019762	ENSAHAP00000015835	G protein subunit alpha L.	G protein subunit beta 4.	0.976
GNAL	GNB5	ENSAHAP00000019762	ENSAHAP00000004238	G protein subunit alpha L.	G protein subunit beta 5.	0.955
GNAL	GNG11	ENSAHAP00000019762	ENSAHAP00000005060	G protein subunit alpha L.	G protein subunit gamma 11.	0.984
GNAL	GNG12	ENSAHAP00000019762	ENSAHAP00000007363	G protein subunit alpha L.	G protein subunit gamma 12.	0.996
GNAL	GNG2	ENSAHAP00000019762	ENSAHAP00000018174	G protein subunit alpha L.	G protein subunit gamma 2.	0.959
GNAL	GNG5	ENSAHAP00000019762	ENSAHAP00000002971	G protein subunit alpha L.	G protein subunit gamma 5.	0.995
GNAL	GNG7	ENSAHAP00000019762	ENSAHAP00000020443	G protein subunit alpha L.	G protein subunit gamma 7.	0.997