STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM185ATransmembrane protein 185A. (337 aa)    
Predicted Functional Partners:
GTPBP6
GTP binding protein 6 (putative).
      
 0.664
EPB41L5
Erythrocyte membrane protein band 4.1 like 5.
      
 0.657
FBXW5
F-box and WD repeat domain containing 5.
      
 0.655
GPR137C
G protein-coupled receptor 137C.
      
 0.655
PTPN4
Protein tyrosine phosphatase non-receptor type 4.
    
 
 0.630
ATP6V0D1
ATPase H+ transporting V0 subunit d1.
    
   0.624
ENSAHAP00000006281
annotation not available
    
   0.624
ATP6V0D2
ATPase H+ transporting V0 subunit d2.
    
   0.624
GPR157
G protein-coupled receptor 157.
      
 0.620
GPR149
G protein-coupled receptor 149.
    
 
 0.616
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.