STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC18B1Solute carrier family 18 member B1. (457 aa)    
Predicted Functional Partners:
LAMTOR5
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.
    
   0.877
APBA1
Amyloid beta precursor protein binding family A member 1.
     
 0.852
ENSAHAP00000002617
annotation not available
     
 0.749
APBA2
Amyloid beta precursor protein binding family A member 2.
     
 0.740
CASK
Calcium/calmodulin dependent serine protein kinase.
     
 0.716
SLC32A1
Solute carrier family 32 member 1.
     
 0.698
SLC17A5
Solute carrier family 17 member 5.
     
 0.690
SLC17A4
Solute carrier family 17 member 4.
     
 0.682
PANX2
Pannexin 2.
      
 0.668
SLC16A1
Solute carrier family 16 member 1.
      
 0.632
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.