STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2CUbiquitin conjugating enzyme E2 C. (140 aa)    
Predicted Functional Partners:
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
   
 0.998
ANAPC2
Anaphase promoting complex subunit 2.
    
 0.998
FAM89A
Family with sequence similarity 89 member A.
   
 0.998
ANAPC4
Anaphase promoting complex subunit 4.
    
 0.998
CDC16
Cell division cycle 16.
   
 0.997
CDC27
Cell division cycle 27.
    
 0.997
ANAPC5
Anaphase promoting complex subunit 5.
    
 0.996
CDC23
Cell division cycle 23.
    
 0.996
ENSAHAP00000019364
annotation not available
   
 0.995
ANAPC1
Anaphase promoting complex subunit 1.
    
 0.994
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.