STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLDN20Claudin 20. (219 aa)    
Predicted Functional Partners:
TJP3
Tight junction protein 3.
    
 0.866
TJP1
Tight junction protein 1.
    
 0.865
CLDN16
Claudin 16.
    
0.864
CLDN23
Claudin 23.
     
 0.855
ENSAHAP00000023093
annotation not available
    
0.849
ENSAHAP00000023610
annotation not available
   
 
 0.839
CLDN34
Claudin 34.
     
 0.838
ENSAHAP00000005608
annotation not available
     
0.837
ENSAHAP00000012182
annotation not available
    
 0.765
ENSAHAP00000000096
annotation not available
    
 0.644
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.