STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLDN20Claudin 20. (219 aa)    
Predicted Functional Partners:
CLDN12
Claudin 12.
     
 0.939
TJP1
Tight junction protein 1.
   
 0.906
CLDN23
Claudin 23.
     
 0.904
CLDN16
Claudin 16.
    
 0.904
TJP3
Tight junction protein 3.
   
 0.904
ENSAHAP00000023093
annotation not available
    
 0.904
PARD3
Par-3 family cell polarity regulator.
     
  0.893
CLDN18
Claudin 18.
     
  0.889
CLDN3
Claudin 3.
     
 0.888
ENSAHAP00000019880
annotation not available
     
 0.888
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.