STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPWD1Peptidylprolyl isomerase domain and WD repeat containing 1. (626 aa)    
Predicted Functional Partners:
PPIL1
Peptidylprolyl isomerase like 1.
    
 0.992
CDC40
Cell division cycle 40.
   
 0.991
DHX38
DEAH-box helicase 38.
   
 0.990
WDR70
WD repeat domain 70.
   
 0.988
CWC25
CWC25 spliceosome associated protein homolog.
    
 0.987
SLU7
SLU7 homolog, splicing factor.
    
 0.986
CWC22
CWC22 spliceosome associated protein homolog.
   
  0.986
CACTIN
Cactin, spliceosome C complex subunit.
    
  0.986
MTREX
Mtr4 exosome RNA helicase.
   
 0.984
CCDC12
Coiled-coil domain containing 12.
    
 0.984
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.