STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001064annotation not available (220 aa)    
Predicted Functional Partners:
RAB39B
RAB39B, member RAS oncogene family.
   
 
0.875
C9orf72
C9orf72-SMCR8 complex subunit.
    
  0.868
SMCR8
SMCR8-C9orf72 complex subunit.
    
 0.858
SQSTM1
Sequestosome 1.
    
 0.848
GDI2
GDP dissociation inhibitor 2.
   
 0.790
RAB3IL1
RAB3A interacting protein like 1.
    
 0.749
ENSAHAP00000025948
annotation not available
    
 0.749
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
     
 0.743
MON1A
MON1 homolog A, secretory trafficking associated.
    
 0.709
ENSAHAP00000017599
annotation not available
    
 0.700
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.