STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
POLR2FRNA polymerase II subunit F. (127 aa)    
Predicted Functional Partners:
POLR2E
RNA polymerase II subunit E.
   
 0.999
POLR2H
RNA polymerase II subunit H.
   
 0.999
POLR1A
RNA polymerase I subunit A.
  
 0.999
POLR3B
RNA polymerase III subunit B.
  
 0.999
CRCP
CGRP receptor component.
   
 0.999
POLR3F
RNA polymerase III subunit F.
   
 0.999
ENSAHAP00000007461
annotation not available
    
 0.999
POLR2K
RNA polymerase II subunit K.
   
 0.999
ENSAHAP00000008941
annotation not available
   
 0.999
ENSAHAP00000009231
annotation not available
   
 0.999
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.