STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001138annotation not available (420 aa)    
Predicted Functional Partners:
DYNC2LI1
Dynein cytoplasmic 2 light intermediate chain 1.
   
 0.993
ENSAHAP00000019151
annotation not available
   
 0.983
WDR34
WD repeat domain 34.
    
 0.976
ENSAHAP00000011091
annotation not available
 
 
 0.955
ENSAHAP00000018928
annotation not available
 
 
 0.954
ENSAHAP00000024832
annotation not available
 
 
 0.954
DYNC1LI1
Dynein cytoplasmic 1 light intermediate chain 1.
   
 0.942
NME8
NME/NM23 family member 8.
   
 0.940
DYNLT1
Dynein light chain Tctex-type 1.
    
 0.933
ENSAHAP00000008832
annotation not available
    
 0.932
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.