STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001141annotation not available (262 aa)    
Predicted Functional Partners:
ENSAHAP00000004937
annotation not available
    
 0.684
ANKRD42
Ankyrin repeat domain 42.
    
 
 0.684
PRPF39
pre-mRNA processing factor 39.
    
 0.684
YTHDC2
YTH domain containing 2.
   
 0.656
ENSAHAP00000022277
annotation not available
   
 0.645
PLRG1
Pleiotropic regulator 1.
    
 0.630
PRPF8
pre-mRNA processing factor 8.
    
 0.628
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.627
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 0.627
WDR33
WD repeat domain 33.
    
 0.625
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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