STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBARPCACN subunit beta associated regulatory protein. (676 aa)    
Predicted Functional Partners:
CACNB2
Calcium voltage-gated channel auxiliary subunit beta 2.
    
   0.877
SHOC2
SHOC2 leucine rich repeat scaffold protein.
    
   0.856
CLRN3
Clarin 3.
      
 0.777
ENSAHAP00000028148
annotation not available
    
   0.726
GHITM
Growth hormone inducible transmembrane protein.
      
 0.687
BORCS6
BLOC-1 related complex subunit 6.
      
 0.608
ENSAHAP00000017021
annotation not available
    
   0.605
SNAP47
Synaptosome associated protein 47.
      
 0.592
CPLX3
Complexin 3.
      
 0.576
MAF1
MAF1 homolog, negative regulator of RNA polymerase III.
      
 0.477
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.