Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001164annotation not available (340 aa)    
Predicted Functional Partners:
MFN1
Mitofusin 1.
    
 0.939
MFN2
Mitofusin 2.
    
 0.939
TOMM70
Translocase of outer mitochondrial membrane 70.
     
 0.909
GABARAPL1
GABA type A receptor associated protein like 1.
    
 0.908
GABARAPL2
GABA type A receptor associated protein like 2.
    
 0.908
ENSAHAP00000026137
annotation not available
    
  0.905
FKBP8
FKBP prolyl isomerase 8.
     
 0.904
ENSAHAP00000002594
annotation not available
    
 0.902
ENSAHAP00000010828
annotation not available
    
 0.902
MAP1LC3A
Microtubule associated protein 1 light chain 3 alpha.
    
 0.902
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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