Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF121Ring finger protein 121. (288 aa)    
Predicted Functional Partners:
CFAP161
Cilia and flagella associated protein 161.
      
 0.621
RNF185
Ring finger protein 185.
 
    
 0.619
MOSPD2
Motile sperm domain containing 2.
      
 0.613
ZGLP1
Zinc finger GATA like protein 1.
      
 0.607
DIS3L2
DIS3 like 3'-5' exoribonuclease 2.
   
  
 0.579
TMTC3
Transmembrane O-mannosyltransferase targeting cadherins 3.
      
 0.576
MARCHF6
Membrane associated ring-CH-type finger 6.
      
 0.552
PIGT
Phosphatidylinositol glycan anchor biosynthesis class T.
      
 0.477
NUDC
Nuclear distribution C, dynein complex regulator.
      
 0.477
GPAA1
Glycosylphosphatidylinositol anchor attachment 1.
      
 0.477
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.