STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NEXMIFNeurite extension and migration factor. (1487 aa)    
Predicted Functional Partners:
RLIM
Ring finger protein, LIM domain interacting.
 
    
 0.740
CCDC112
Coiled-coil domain containing 112.
      
 0.592
COP1
COP1 E3 ubiquitin ligase.
      
 0.577
EPHX4
Epoxide hydrolase 4.
      
 0.575
TVP23A
Trans-golgi network vesicle protein 23 homolog A.
      
 0.574
F2RL1
F2R like trypsin receptor 1.
      
 0.572
CACNA1I
Calcium voltage-gated channel subunit alpha1 I.
      
 0.572
LONRF2
LON peptidase N-terminal domain and ring finger 2.
      
 0.506
GSC
Goosecoid homeobox.
      
 0.499
FAM189A2
Family with sequence similarity 189 member A2.
      
 0.477
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.