Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001184annotation not available (287 aa)    
Predicted Functional Partners:
ENSAHAP00000001119
annotation not available
 
  
  0.938
SMC1B
Structural maintenance of chromosomes 1B.
   
 0.919
SMC3
Structural maintenance of chromosomes 3.
   
 0.893
NIPBL
NIPBL cohesin loading factor.
   
 0.885
RAD21L1
RAD21 cohesin complex component like 1.
   
 0.824
RAD21
RAD21 cohesin complex component.
   
 0.824
PDS5A
PDS5 cohesin associated factor A.
   
 0.822
PDS5B
PDS5 cohesin associated factor B.
   
 0.822
WAPL
WAPL cohesin release factor.
   
 0.788
ESCO1
Establishment of sister chromatid cohesion N-acetyltransferase 1.
   
 0.739
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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