STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNX21Sorting nexin family member 21. (217 aa)    
Predicted Functional Partners:
RPS6KC1
Ribosomal protein S6 kinase C1.
    
 0.695
LRRK1
Leucine rich repeat kinase 1.
    
   0.643
ENSAHAP00000009260
annotation not available
   
 
 0.619
ENSAHAP00000025459
annotation not available
   
 
 0.619
PXK
PX domain containing serine/threonine kinase like.
      
 0.593
SNX31
Sorting nexin 31.
      
 0.585
HS1BP3
HCLS1 binding protein 3.
      
 0.573
PDPK1
3-phosphoinositide dependent protein kinase 1.
    
  0.537
STX6
Syntaxin 6.
    
 0.519
STX8
Syntaxin 8.
    
 0.519
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.