STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GAS2L3Growth arrest specific 2 like 3. (727 aa)    
Predicted Functional Partners:
ENSAHAP00000026841
annotation not available
   
 0.901
PDLIM4
PDZ and LIM domain 4.
   
 0.898
PXN
Paxillin.
   
 0.844
LDB3
LIM domain binding 3.
    
  0.814
PDLIM1
PDZ and LIM domain 1.
   
 0.809
PDLIM3
PDZ and LIM domain 3.
   
 0.809
PDLIM7
PDZ and LIM domain 7.
   
 0.802
PDLIM5
PDZ and LIM domain 5.
   
 0.802
CASK
Calcium/calmodulin dependent serine protein kinase.
   
  0.701
ENSAHAP00000016308
annotation not available
     
  0.655
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.