STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001232annotation not available (193 aa)    
Predicted Functional Partners:
GATA6
GATA binding protein 6.
    
 0.809
SOX17
SRY-box transcription factor 17.
    
 0.738
ENSAHAP00000010047
annotation not available
    
 0.716
GATA3
GATA binding protein 3.
    
 0.707
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 
 0.679
ENSAHAP00000001935
annotation not available
   
  
 0.663
ENSAHAP00000018382
annotation not available
      
 0.658
IFNG
Interferon gamma.
   
 0.651
TRPS1
Transcriptional repressor GATA binding 1.
    
 0.642
FOXA2
Forkhead box A2.
   
 0.628
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.