STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCORBCL6 corepressor. (1765 aa)    
Predicted Functional Partners:
PCGF6
Polycomb group ring finger 6.
    
 0.971
ENSAHAP00000006049
annotation not available
    
 0.953
ENSAHAP00000006052
annotation not available
    
 0.953
CBX8
Chromobox 8.
    
 0.953
PHC1
Polyhomeotic homolog 1.
 
 
  0.947
CBX4
Chromobox 4.
    
 0.945
ENSAHAP00000012007
annotation not available
    
  0.943
BRCA1
BRCA1 DNA repair associated.
    
  0.940
BARD1
BRCA1 associated RING domain 1.
    
 
0.940
CDC27
Cell division cycle 27.
   
  0.939
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.