STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LPCAT2Lysophosphatidylcholine acyltransferase 2. (548 aa)    
Predicted Functional Partners:
PLA2G7
Phospholipase A2 group VII.
     
 0.957
PAFAH2
Platelet activating factor acetylhydrolase 2.
     
 0.957
CEPT1
Choline/ethanolamine phosphotransferase 1.
     
 0.952
LPCAT3
Lysophosphatidylcholine acyltransferase 3.
     
 0.952
CHPT1
Choline phosphotransferase 1.
     
 0.938
PTDSS1
Phosphatidylserine synthase 1.
     
 0.930
LCLAT1
Lysocardiolipin acyltransferase 1.
     
 0.928
PEMT
Phosphatidylethanolamine N-methyltransferase.
     
 0.928
LPGAT1
Lysophosphatidylglycerol acyltransferase 1.
     
 0.923
PLD4
Phospholipase D family member 4.
   
 
 0.921
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.