STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NCAM1Neural cell adhesion molecule 1. (1064 aa)    
Predicted Functional Partners:
CHL1
Cell adhesion molecule L1 like.
   
 0.903
NCAM2
Neural cell adhesion molecule 2.
     
  0.893
NRCAM
Neuronal cell adhesion molecule.
   
 0.844
NFASC
Neurofascin.
   
 0.808
FGFR1
Fibroblast growth factor receptor 1.
    
 0.807
FGFR2
Fibroblast growth factor receptor 2.
    
 0.807
ST8SIA2
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2.
   
 
 0.747
CNTN2
Contactin 2.
   
 0.724
ST8SIA4
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4.
   
 
 0.716
AGRN
Agrin.
     
 0.671
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.