STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GCGC vitamin D binding protein. (487 aa)    
Predicted Functional Partners:
CUBN
Cubilin.
    
 0.970
AHSG
Alpha 2-HS glycoprotein.
   
  
 0.949
AMBP
Alpha-1-microglobulin/bikunin precursor.
   
 
 0.931
APOH
Apolipoprotein H.
   
  
 0.927
TTR
Transthyretin.
   
  
 0.902
ENSAHAP00000026210
annotation not available
   
 
 0.872
SERPINC1
Serpin family C member 1.
   
 
 0.868
FGB
Fibrinogen beta chain.
   
 
 0.864
CYP2R1
Cytochrome P450 family 2 subfamily R member 1.
   
  
 0.811
FGA
Fibrinogen alpha chain.
   
 
 0.802
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.