STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGF16Fibroblast growth factor 16. (207 aa)    
Predicted Functional Partners:
FGFR1
Fibroblast growth factor receptor 1.
    
 0.962
FGFR2
Fibroblast growth factor receptor 2.
    
 0.953
FGFR4
Fibroblast growth factor receptor 4.
    
 0.953
FGFR3
Fibroblast growth factor receptor 3.
    
 0.951
ENSAHAP00000024655
annotation not available
   
 0.916
KDR
Kinase insert domain receptor.
   
 0.914
ENSAHAP00000006656
annotation not available
   
 0.901
PDGFRB
Platelet derived growth factor receptor beta.
    
 0.898
KIT
KIT proto-oncogene, receptor tyrosine kinase.
    
 0.896
CSF1R
Colony stimulating factor 1 receptor.
    
 0.895
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.