STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB3GAP1RAB3 GTPase activating protein catalytic subunit 1. (1012 aa)    
Predicted Functional Partners:
RAB3GAP2
RAB3 GTPase activating non-catalytic protein subunit 2.
   
 0.999
DMXL2
Dmx like 2.
   
 
 0.948
VAPB
VAMP associated protein B and C.
    
 
 0.908
VAPA
VAMP associated protein A.
    
 
 0.870
ENSAHAP00000012247
annotation not available
    
 0.834
RAB18
RAB18, member RAS oncogene family.
    
 0.834
DMXL1
Dmx like 1.
   
 
 0.821
SLC38A6
Solute carrier family 38 member 6.
   
    0.810
TBC1D20
TBC1 domain family member 20.
      
 0.808
ENSAHAP00000004846
annotation not available
   
 
 0.765
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.