STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACBD4acyl-CoA binding domain containing 4. (359 aa)    
Predicted Functional Partners:
PEX14
Peroxisomal biogenesis factor 14.
   
 0.735
ACOX3
acyl-CoA oxidase 3, pristanoyl.
  
 0.709
ACOX2
acyl-CoA oxidase 2.
  
 0.706
ACOX1
acyl-CoA oxidase 1.
  
 0.706
PEX13
Peroxisomal biogenesis factor 13.
   
 0.700
PEX16
Peroxisomal biogenesis factor 16.
   
 0.699
ENSAHAP00000021971
annotation not available
    
 0.684
ACAA1
acetyl-CoA acyltransferase 1.
  
 
 0.680
ENSAHAP00000025690
annotation not available
     
 0.670
ACADS
acyl-CoA dehydrogenase short chain.
  
 0.664
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.