STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLTPPhospholipid transfer protein. (501 aa)    
Predicted Functional Partners:
APOB
Apolipoprotein B.
     
 0.974
LCAT
Lecithin-cholesterol acyltransferase.
     
 0.971
LIPC
Lipase C, hepatic type.
     
 0.970
CETP
Cholesteryl ester transfer protein.
     
 0.961
APOA4
Apolipoprotein A4.
     
 0.950
SEL1L3
SEL1L family member 3.
    
   0.949
ENSAHAP00000022209
annotation not available
   
 0.947
ENSAHAP00000003885
annotation not available
     
 0.945
APOH
Apolipoprotein H.
     
 0.943
APOA1
Apolipoprotein A1.
     
 0.940
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.