STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PCIF1PDX1 C-terminal inhibiting factor 1. (711 aa)    
Predicted Functional Partners:
ENSAHAP00000004557
annotation not available
    
   0.822
METTL4
Methyltransferase like 4.
      
 0.657
CUL3
Cullin 3.
      
 0.589
ENSAHAP00000007461
annotation not available
    
   0.489
ENSAHAP00000025125
annotation not available
    
   0.489
PRR11
Proline rich 11.
      
 0.477
DCAKD
dephospho-CoA kinase domain containing.
      
 0.476
WTAP
WT1 associated protein.
      
 0.473
METTL16
Methyltransferase like 16.
      
 0.458
BTBD7
BTB domain containing 7.
      
 0.435
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.