STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LARP1La ribonucleoprotein 1, translational regulator. (960 aa)    
Predicted Functional Partners:
DHX9
DExH-box helicase 9.
   
 0.960
RPTOR
Regulatory associated protein of MTOR complex 1.
   
 
 0.944
MTOR
Mechanistic target of rapamycin kinase.
   
 
 0.939
LARP4B
La ribonucleoprotein 4B.
   
0.935
RICTOR
RPTOR independent companion of MTOR complex 2.
     
 0.925
RPL8
Ribosomal protein L8.
    
 0.925
MLST8
MTOR associated protein, LST8 homolog.
     
 0.920
ENSAHAP00000017033
annotation not available
     
 0.919
RPS28
Ribosomal protein S28.
    
  0.909
NUFIP2
Nuclear FMR1 interacting protein 2.
     
 0.909
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.