STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RASSF8Ras association domain family member 8. (384 aa)    
Predicted Functional Partners:
PARD3
Par-3 family cell polarity regulator.
    
 
 0.858
PPP1R13B
Protein phosphatase 1 regulatory subunit 13B.
    
 
 0.828
IL10RB
Interleukin 10 receptor subunit beta.
    
 
 0.801
FRMD6
FERM domain containing 6.
    
   0.731
FRMD1
FERM domain containing 1.
    
   0.731
GNPTAB
N-acetylglucosamine-1-phosphate transferase subunits alpha and beta.
    
   0.727
TP53BP2
Tumor protein p53 binding protein 2.
    
 
 0.698
IFNAR1
Interferon alpha and beta receptor subunit 1.
    
 
 0.644
NCK2
NCK adaptor protein 2.
    
   0.624
PARD3B
Par-3 family cell polarity regulator beta.
    
 
 0.538
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.