STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001341annotation not available (397 aa)    
Predicted Functional Partners:
SNAP29
Synaptosome associated protein 29.
    
 0.954
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.951
VAMP7
Vesicle associated membrane protein 7.
   
 0.934
YKT6
YKT6 v-SNARE homolog.
   
 0.932
STX8
Syntaxin 8.
    
 0.917
VTI1B
Vesicle transport through interaction with t-SNAREs 1B.
   
 0.899
ENSAHAP00000017578
annotation not available
    
 0.893
GOSR1
Golgi SNAP receptor complex member 1.
   
 0.892
STX18
Syntaxin 18.
   
 0.892
ENSAHAP00000023157
annotation not available
    
 0.884
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.