STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TDRD7Tudor domain containing 7. (1097 aa)    
Predicted Functional Partners:
PIMREG
PICALM interacting mitotic regulator.
    
 
 0.951
PIWIL2
Piwi like RNA-mediated gene silencing 2.
   
 0.836
GABPB1
GA binding protein transcription factor subunit beta 1.
   
 0.796
ENSAHAP00000019908
annotation not available
   
 0.794
CDK17
Cyclin dependent kinase 17.
    
 
 0.794
GABPB2
GA binding protein transcription factor subunit beta 2.
   
 0.791
TDRD9
Tudor domain containing 9.
  
 0.747
MAP2K1
Mitogen-activated protein kinase kinase 1.
    
  0.723
MAP2K5
Mitogen-activated protein kinase kinase 5.
    
  0.723
ENSAHAP00000028123
annotation not available
    
  0.723
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.