STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRNAU1APtRNA selenocysteine 1 associated protein 1. (282 aa)    
Predicted Functional Partners:
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
   
 0.994
SNRPC
Small nuclear ribonucleoprotein polypeptide C.
   
 0.993
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
   
 0.991
ENSAHAP00000022277
annotation not available
   
 0.991
SF3B1
Splicing factor 3b subunit 1.
   
 0.990
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
   
 0.990
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.990
SF3B4
Splicing factor 3b subunit 4.
    
0.989
SF3A2
Splicing factor 3a subunit 2.
    
 0.988
SF3A1
Splicing factor 3a subunit 1.
    
 0.987
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.