STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001357annotation not available (349 aa)    
Predicted Functional Partners:
CCN2
Cellular communication network factor 2.
     
  0.893
TGFB3
Transforming growth factor beta 3.
      
 0.582
TGFB2
Transforming growth factor beta 2.
      
 0.579
DCN
Decorin.
      
 0.477
EDN1
Endothelin 1.
      
 0.473
EGF
Epidermal growth factor.
    
 
 0.451
IL1B
Interleukin 1 beta.
   
  
 0.442
SMAD4
SMAD family member 4.
      
 0.441
IL6
Interleukin 6.
      
 0.435
ENSAHAP00000024578
annotation not available
    
 
 0.406
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.