Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHA2Pleckstrin homology domain containing A2. (428 aa)    
Predicted Functional Partners:
SNTA1
Syntrophin alpha 1.
    
   0.893
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.877
ENSAHAP00000026724
annotation not available
    
 0.747
ENSAHAP00000026732
annotation not available
    
 0.747
H2AZ2
H2A.Z variant histone 2.
   
 0.713
H2AZ1
H2A.Z variant histone 1.
   
 0.713
GLYR1
Glyoxylate reductase 1 homolog.
    
   0.696
TACC1
Transforming acidic coiled-coil containing protein 1.
    
 0.689
PAXIP1
PAX interacting protein 1.
    
 0.687
TM2D2
TM2 domain containing 2.
      
 0.684
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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