STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEP152Centrosomal protein 152. (1621 aa)    
Predicted Functional Partners:
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.997
WDR12
WD repeat domain 12.
   
 0.996
WDR74
WD repeat domain 74.
   
 0.995
FTSJ3
FtsJ RNA 2'-O-methyltransferase 3.
   
 0.993
RPF2
Ribosome production factor 2 homolog.
   
 0.992
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 0.992
GNL2
G protein nucleolar 2.
   
 0.992
DDX18
DEAD-box helicase 18.
   
 0.991
ENSAHAP00000003962
annotation not available
   
 0.991
GTPBP4
GTP binding protein 4.
   
 0.991
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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